Basic Information
Locus ID:
nbisL1-mrna-8996
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000004F_pilon | 2071662 | 2075245 | - | nbisL1-mrna-8996 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 116,738.53 Da | 40.78 | 101.01 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 69 | 104 | 7.8E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 726 | 1005 | 1.5E-48 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 148 | 191 | 2.7E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 255 | 312 | 1.5E-9 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 720 | 1007 | 1.89E-72 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 327 | 646 | 5.34E-44 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 79 | 412 | 2.82E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 66 | 242 | 5.2E-48 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 804 | 1029 | 6.8E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 420 | 662 | 3.3E-57 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 243 | 419 | 4.2E-46 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 708 | 803 | 5.5E-20 | - |
| SMART | SM00369 | LRR_typ_2 | 130 | 154 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 584 | 608 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 202 | 226 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 275 | 299 | 4.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 536 | 560 | 88.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 346 | 370 | 210.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 724 | 1011 | 1.1E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 724 | 1011 | 37.332855 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 859 | 871 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 730 | 753 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_021646548.1 | receptor-like protein kinase 5 isoform X1 [Hevea brasiliensis] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2NFR4 | Serine-threonine protein kinase plant-type OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology