Basic Information
Locus ID:
nbisL1-mrna-8980
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1D
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 2492481 | 2500137 | + | nbisL1-mrna-8980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 183,982.92 Da | 42.35 | 79.44 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1353 | 1613 | 1.1402E-140 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 258 | 522 | 1.15185E-102 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1391 | 1556 | 7.5E-35 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 259 | 513 | 1.7E-26 | IPR002423 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 320 | 488 | 2.88E-30 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1352 | 1613 | 1.57E-79 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 319 | 488 | 7.1E-38 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1336 | 1472 | 1.6E-35 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1475 | 1614 | 8.3E-42 | - |
| SMART | SM00330 | PIPK_2 | 1325 | 1614 | 1.4E-97 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1283 | 1613 | 56.606369 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 177 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 206 | 241 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34260.1 | FORMS APLOID AND BINUCLEATE CELLS 1A. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_024446686.2 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D [Populus trichocarpa] | 0 |
| Q9XID0 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D OS=Arabidopsis thaliana OX=3702 GN=FAB1D PE=3 SV=1 | 0 | |
| TrEMBL | A0A2P2ME17 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology