Basic Information
Locus ID:
nbisL1-mrna-8892
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001135F_pilon | 3586444 | 3590987 | + | nbisL1-mrna-8892 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.31 | 91,623.14 Da | 35.78 | 97.40 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 250 | 272 | 0.033 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 537 | 558 | 0.53 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 370 | 390 | 0.69 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 77 | 5.7E-4 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 82 | 141 | 8.8E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 274 | 333 | 3.7E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 717 | 808 | 5.4E-14 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 85 | 421 | 3.22E-66 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 313 | 634 | 6.57E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 717 | 814 | 1.33E-21 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 701 | 822 | 3.6E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 240 | 2.0E-45 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 340 | 636 | 3.2E-80 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 241 | 339 | 1.4E-33 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 440 | 464 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 296 | 320 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 200 | 224 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 128 | 152 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 465 | 488 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 344 | 368 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 248 | 272 | 40.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 714 | 836 | 14.20963 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 720 | 743 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 440 | 453 | 1.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 299 | 312 | 1.9E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_012090461.1 | - | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A7J8PV41 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology