Basic Information
Locus ID:
nbisL1-mrna-8873
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 6412015 | 6417801 | - | nbisL1-mrna-8873 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 61,739.42 Da | 42.28 | 80.09 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 106 | 475 | 0.0 | - |
| Pfam | PF00433 | Protein kinase C terminal domain | 430 | 474 | 4.6E-5 | IPR017892 |
| Pfam | PF00069 | Protein kinase domain | 108 | 411 | 6.5E-64 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 82 | 462 | 2.83E-87 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 308 | 429 | 2.7E-41 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 192 | 258 | 1.8E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 106 | 191 | 1.8E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 430 | 441 | 2.7E-41 | - |
| SMART | SM00133 | pkinase_C_6 | 412 | 476 | 8.6E-8 | IPR000961 |
| SMART | SM00220 | serkin_6 | 108 | 411 | 5.0E-100 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 412 | 484 | 13.337515 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 108 | 411 | 46.251408 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 114 | 137 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 227 | 239 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 294 | - | - |
| Coils | Coil | Coil | 71 | 101 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G09890.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_002510211.1 | serine/threonine-protein kinase tricornered [Ricinus communis] | 0 |
| Q2LZZ7 | Serine/threonine-protein kinase tricornered OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=trc PE=3 SV=1 | 0 | |
| TrEMBL | A0A2P2L1Z4 | Serine/threonine-protein kinase tricorner-like OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology