Basic Information
Locus ID:
nbisL1-mrna-8815
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000004F_pilon | 846069 | 848672 | - | nbisL1-mrna-8815 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.38 | 17,795.69 Da | 34.26 | 64.14 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 132 | 155 | 8.32E-5 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 122 | 162 | 3.9E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 65 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25760.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_050134730.1 | casein kinase 1-like protein HD16 [Malus sylvestris] | 0 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A834G662 | Protein kinase domain-containing protein OS=Rhododendron simsii OX=118357 GN=RHSIM_Rhsim12G0202700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Brassica nigra | 1 | BniB02g011910.2N |
| Poaceae | Echinochloa crus-galli | 1 | CH02.3298 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-26882, nbis-gene-35699 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-8815 |