Basic Information
Locus ID:
nbisL1-mrna-880
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000003F_pilon | 5306053 | 5309788 | - | nbisL1-mrna-880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.82 | 76,887.42 Da | 40.64 | 93.07 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 59 | 6.1E-6 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 322 | 360 | 0.0033 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 88 | 144 | 7.1E-10 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 368 | 424 | 2.6E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 435 | 1.11E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 552 | 648 | 7.53E-11 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 321 | 1.7E-73 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 322 | 447 | 1.4E-33 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 527 | 665 | 8.0E-18 | - |
| SMART | SM00369 | LRR_typ_2 | 183 | 207 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 411 | 435 | 38.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 387 | 410 | 86.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 109 | 132 | 0.005 | IPR003591 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 685 | 720 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_034920413.1 | receptor-like kinase TMK4 [Populus alba] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N5MPL5 | Protein kinase domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_007252 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology