Basic Information
Locus ID:
nbisL1-mrna-8778
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 57093970 | 57095481 | - | nbisL1-mrna-8778 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.60 | 55,947.32 Da | 49.38 | 81.75 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 59 | 322 | 4.6E-39 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 40 | 333 | 3.46E-66 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 133 | 343 | 1.9E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 26 | 132 | 8.8E-21 | - |
| SMART | SM00220 | serkin_6 | 57 | 327 | 2.9E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 57 | 334 | 33.855892 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 176 | 188 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 63 | 86 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 359 | 380 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28390.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_039055327.1 | LOW QUALITY PROTEIN: serine/threonine-protein kinase-like protein At1g28390 [Hibiscus syriacus] | 0 |
| Q9SGN7 | Serine/threonine-protein kinase-like protein At1g28390 OS=Arabidopsis thaliana OX=3702 GN=At1g28390 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1R3K2N5 | Protein kinase domain-containing protein OS=Corchorus olitorius OX=93759 GN=COLO4_11954 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology