Basic Information
Locus ID:
nbisL1-mrna-8726
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 4576628 | 4580861 | - | nbisL1-mrna-8726 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 56,384.96 Da | 40.70 | 104.05 | 0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 43 | 419 | 3.9E-47 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 129 | 181 | 2.5E-14 | - |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 82 | 96 | 6.9E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 137 | 147 | 6.9E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 97 | 105 | 6.9E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 68 | 79 | 6.9E-11 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55470.1 | Na+/H+ (sodium hydrogen) exchanger 3. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_021606988.2 | sodium/hydrogen exchanger 4 [Manihot esculenta] | 0 |
| Q8S397 | Sodium/hydrogen exchanger 4 OS=Arabidopsis thaliana OX=3702 GN=NHX4 PE=2 SV=2 | 0 | |
| TrEMBL | B9SSQ7 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology