Basic Information
Locus ID:
nbisL1-mrna-8661
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Pentatricopeptide repeat-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 1344100 | 1346861 | + | nbisL1-mrna-8661 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.46 | 30,895.05 Da | 42.58 | 82.63 | -0.31 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04780.1 | Pentatricopeptide repeat (PPR) superfamily protein. | 0 |
| RefSeq | XP_021598696.2 | pentatricopeptide repeat-containing protein At3g12770 [Manihot esculenta] | 0 |
| Q9LZ19 | Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H16 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6A6LZK6 | DYW_deaminase domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_005619 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina glauca | 2 | Cgl04G0285, Cgl07G1502 |
| Rhizophoraceae | Rhizophora apiculata | 4 | nbisL1-mrna-8660, nbisL1-mrna-8661, nbisL1-mrna-9681 ... |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-9143 |