Basic Information
Locus ID:
nbisL1-mrna-8661
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 56217595 | 56217986 | + | nbisL1-mrna-8661 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.68 | 12,531.11 Da | 31.54 | 65.91 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18310.1 | 0 | |
| RefSeq | XP_016730770.1 | uncharacterized protein LOC107941698 [Gossypium hirsutum] | 0 |
| TrEMBL | A0A7J9JG74 | Uncharacterized protein (Fragment) OS=Gossypium armourianum OX=34283 GN=Goarm_017727 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg10742 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_20480, gene_9065 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah037782 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g202660 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg43641 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg18267 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00020357 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl78051, Sgl80556 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000017186 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.9AG0000690, CQ.Regalona.r1.9BG0021690 |
| Apiaceae | Apium graveolens | 1 | Ag4G01784 |
| Arecaceae | Cocos nucifera | 2 | COCNU_06G003270, COCNU_06G003280 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103697887, gene-LOC103716030 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.396.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri15G25136, Ftri5G15556 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G18310.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10003730m.g.v1.0, Thhalv10020051m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g16450.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB01g046220.2N, BniB08g051880.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G2805 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl03G2959 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno16g04140 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate03g17100 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-8660, nbisL1-mrna-8661 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG05.808 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00028132 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb3G19892 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0393090.1.CDS1 |
| Poaceae | Oryza coarctata | 2 | Oco05G007690, Oco06G007990 |
| Poaceae | Oryza sativa | 2 | LOC_Os03g13720.1, LOC_Os09g01700.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G423000 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr01G027920, Chr01G029010, Chr12G010490, Chr12G011530 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G397100 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG010160, gene_TRIDC4BG040450 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G072900.1.cds1, TraesCS4B02G229000.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb399070_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-3925, nbis-gene-53873 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g26580, Zma_g4055 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG04.1694 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc09g04600 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_3_RagTag.757 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-1202 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-4178 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-6435 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000019l.316 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00012647 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-5219 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-13194 |
| Salicaceae | Populus euphratica | 1 | populus_peu29651 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132645188 |
| Solanaceae | Solanum chilense | 1 | SOLCI002883700 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107008296 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_132 |
| Tamaricaceae | Tamarix chinensis | 1 | TC08G0571 |
| Zosteraceae | Zostera marina | 1 | Zosma05g13760.v3.1 |