Basic Information
Locus ID:
nbisL1-mrna-8660
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
P21-activated protein kinase-interacting protein 1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 1296223 | 1296976 | + | nbisL1-mrna-8660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 13,544.42 Da | 44.64 | 81.93 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 3 | 72 | 8.79E-6 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 1 | 84 | 5.4E-8 | IPR015943 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021662340.1 | p21-activated protein kinase-interacting protein 1-like [Hevea brasiliensis] | 0 |
| TrEMBL | A0A6A6M0M9 | WD_REPEATS_REGION domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_005629 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina glauca | 2 | Cgl04G0285, Cgl07G1502 |
| Rhizophoraceae | Rhizophora apiculata | 4 | nbisL1-mrna-8660, nbisL1-mrna-8661, nbisL1-mrna-9681 ... |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-9143 |