Basic Information
Locus ID:
nbisL1-mrna-8642
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001135F_pilon | 2105538 | 2108471 | - | nbisL1-mrna-8642 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.49 | 42,120.81 Da | 38.68 | 80.84 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 83 | 351 | 3.23085E-115 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 78 | 351 | 5.7E-62 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 64 | 351 | 2.32E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 65 | 160 | 2.7E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 177 | 361 | 4.8E-60 | - |
| SMART | SM00220 | serkin_6 | 77 | 354 | 1.1E-57 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 77 | 354 | 40.852219 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 218 | 230 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 278 | 300 | 5.3E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 174 | 187 | 5.3E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 322 | 344 | 5.3E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 212 | 230 | 5.3E-15 | IPR001245 |
| Coils | Coil | Coil | 9 | 36 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50000.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021592270.1 | serine/threonine-protein kinase STY13 [Manihot esculenta] | 0 |
| Q9FGB1 | Serine/threonine-protein kinase 52 OS=Arabidopsis thaliana OX=3702 GN=CBC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JRS3 | Uncharacterized protein MANES_14G067100 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology