Basic Information
Locus ID:
nbisL1-mrna-8617
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Short Name:
CAX5
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 3550811 | 3554605 | - | nbisL1-mrna-8617 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 56,511.22 Da | 30.73 | 108.16 | 0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 89 | 244 | 1.6E-21 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 282 | 421 | 1.6E-22 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 118 | 260 | 1.3E-15 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 265 | 425 | 1.1E-20 | IPR044880 |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 70 | 424 | 5.8E-103 | IPR004798 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 58 | 424 | 1.4E-114 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_021646000.1 | - | 0 |
| Q8L783 | Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana OX=3702 GN=CAX5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2L0N5 | Vacuolar cation/proton exchanger OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology