Basic Information
Locus ID:
nbisL1-mrna-8594
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000059F_pilon | 4923468 | 4926800 | + | nbisL1-mrna-8594 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.31 | 64,262.54 Da | 46.15 | 82.86 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 160 | 234 | 9.39384E-14 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 273 | 366 | 6.3E-9 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 160 | 248 | 8.1E-13 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 160 | 248 | 1.57E-12 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 450 | 561 | 8.5E-6 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 138 | 283 | 9.3E-17 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 284 | 389 | 5.7E-12 | - |
| SMART | SM00875 | BACK_2 | 266 | 368 | 2.7E-7 | IPR011705 |
| SMART | SM00225 | BTB_4 | 153 | 251 | 4.1E-9 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 151 | 220 | 12.805203 | IPR000210 |
| Coils | Coil | Coil | 77 | 97 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_012086784.1 | BTB/POZ domain-containing protein POB1 [Jatropha curcas] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2JC08 | Uncharacterized protein MANES_02G013900 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology