Basic Information
Locus ID:
nbisL1-mrna-8539
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000059F_pilon | 4577035 | 4578457 | - | nbisL1-mrna-8539 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 46,191.62 Da | 38.80 | 88.99 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18316 | BTB_POZ_KCTD-like | 28 | 105 | 9.27135E-21 | - |
| Pfam | PF02214 | BTB/POZ domain | 28 | 114 | 4.6E-13 | IPR003131 |
| SUPERFAMILY | SSF54695 | POZ domain | 25 | 113 | 2.55E-15 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 5 | 120 | 2.1E-19 | IPR011333 |
| SMART | SM00225 | BTB_4 | 26 | 122 | 4.9E-6 | IPR000210 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41330.1 | BTB/POZ domain with WD40/YVTN repeat-like protein. | 0 |
| RefSeq | XP_002509821.1 | BTB/POZ domain-containing protein At5g41330 [Ricinus communis] | 0 |
| Q9FN67 | BTB/POZ domain-containing protein At5g41330 OS=Arabidopsis thaliana OX=3702 GN=At5g41330 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2J5L7 | Potassium channel tetramerization domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology