Basic Information
Locus ID:
nbisL1-mrna-8524
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Serine threonine-protein kinase-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 2639352 | 2642188 | + | nbisL1-mrna-8524 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.67 | 53,891.57 Da | 39.40 | 88.02 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 56 | 319 | 1.2E-38 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 35 | 329 | 2.83E-66 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 129 | 330 | 7.3E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 35 | 128 | 4.1E-22 | - |
| SMART | SM00220 | serkin_6 | 53 | 321 | 6.8E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 53 | 334 | 34.845268 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 59 | 81 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 172 | 184 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51990.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021684692.1 | serine/threonine-protein kinase-like protein At3g51990 [Hevea brasiliensis] | 0 |
| Q9SV05 | Serine/threonine-protein kinase-like protein At3g51990 OS=Arabidopsis thaliana OX=3702 GN=At3g51990 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2Q427 | Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology