Basic Information
Locus ID:
nbisL1-mrna-8463
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 54204050 | 54208606 | + | nbisL1-mrna-8463 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 58,740.52 Da | 41.87 | 75.93 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 15 | 90 | 2.2E-12 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 133 | 192 | 3.0E-15 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 10 | 195 | 2.98E-33 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 91 | 6.1E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 125 | 235 | 5.2E-20 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 15 | 240 | 13.22025 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 21 | 44 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 325 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 386 | 408 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 220 | 240 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 332 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12200.1 | NIMA-related kinase 7. Encodes AtNek7, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_039023071.1 | serine/threonine-protein kinase Nek6-like [Hibiscus syriacus] | 0 |
| Q6YY75 | Serine/threonine-protein kinase Nek6 OS=Oryza sativa subsp. japonica OX=39947 GN=NEK6 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6A2YW90 | Serine/threonine-protein kinase Nek6 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111199pilonHSYRG00075 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology