Basic Information
Locus ID:
nbisL1-mrna-8424
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001135F_pilon | 792127 | 795133 | - | nbisL1-mrna-8424 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 72,128.76 Da | 38.46 | 103.49 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 379 | 642 | 4.12853E-88 | - |
| Pfam | PF00069 | Protein kinase domain | 376 | 636 | 5.4E-39 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 69 | 128 | 2.2E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 64 | 7.6E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 377 | 638 | 2.22E-59 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 49 | 215 | 3.7E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 448 | 652 | 3.1E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 351 | 447 | 3.7E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 186 | 231 | 2.9E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 185 | 6.4E-40 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 373 | 642 | 33.248127 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 165 | 187 | 7.604145 | IPR001611 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_021647181.1 | probable inactive receptor kinase RLK902 [Hevea brasiliensis] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2L9T5 | Uncharacterized protein MANES_06G003700 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology