Basic Information
Locus ID:
nbisL1-mrna-8346
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 16405919 | 16414089 | + | nbisL1-mrna-8346 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.74 | 89,746.16 Da | 40.38 | 92.14 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 629 | 734 | 2.4E-15 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 44 | 374 | 2.38E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 610 | 734 | 7.72E-29 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 281 | 408 | 3.0E-16 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 596 | 700 | 8.7E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 182 | 280 | 3.8E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 181 | 2.6E-38 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 625 | 823 | 11.73618 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 631 | 653 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021638816.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Hevea brasiliensis] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JI79 | Uncharacterized protein MANES_14G162000 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology