Basic Information
Locus ID:
nbisL1-mrna-8314
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002078F_pilon | 5155449 | 5162905 | - | nbisL1-mrna-8314 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.68 | 39,803.58 Da | 43.00 | 81.00 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 71 | 2.1E-9 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 299 | 369 | 9.0E-7 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 136 | 1.13E-13 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 278 | 368 | 1.54E-16 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 139 | 8.7E-19 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 262 | 371 | 2.9E-22 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 297 | 372 | 11.792716 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 303 | 326 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 169 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 148 | 165 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_011048642.1 | PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 6 [Populus euphratica] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2LNH5 | Leucine-rich repeat receptor-like protein kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology