Basic Information
Locus ID:
nbisL1-mrna-8290
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
SPA1-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 52457598 | 52459194 | + | nbisL1-mrna-8290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.69 | 41,557.08 Da | 67.51 | 78.19 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 74 | 330 | 1.42E-16 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 90 | 337 | 1.3E-18 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 370 | 8.640834 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15354.2 | - | 0 |
| RefSeq | XP_052479318.1 | protein SPA1-RELATED 3 isoform X2 [Gossypium raimondii] | 0 |
| Q9LJR3 | Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A2XYX9 | Protein SPA1-RELATED 4 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112370pilonHSYRG00027 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology