Basic Information
Locus ID:
nbisL1-mrna-8259
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 29130143 | 29134372 | - | nbisL1-mrna-8259 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.69 | 56,416.56 Da | 38.50 | 88.12 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 193 | 459 | 4.63597E-103 | - |
| Pfam | PF00069 | Protein kinase domain | 188 | 455 | 1.0E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 171 | 465 | 1.07E-85 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 263 | 473 | 6.1E-65 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 167 | 262 | 6.4E-35 | - |
| SMART | SM00220 | serkin_6 | 187 | 458 | 2.7E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 187 | 451 | 38.760387 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 193 | 216 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 309 | 321 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 458 | 477 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 458 | 506 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56720.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006382268.1 | - | 0 |
| Q9SJG2 | Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana OX=3702 GN=At2g42960 PE=3 SV=1 | 0 | |
| TrEMBL | B9N417 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G003300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology