halophFGD

Basic Information

Locus ID: nbisL1-mrna-8227

Species & Taxonomic ID: Hibiscus hamabo Siebold & Zucc. & 1841

Genome Assembly:

Description: G-type lectin S-receptor-like serine threonine-protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2	51900890	51903525	-	nbisL1-mrna-8227

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.91	55,810.88 Da	32.38	92.19	-0.18

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	330	410	4.3E-12	IPR001245
Pfam	PF01453	D-mannose binding lectin	13	118	4.6E-22	IPR001480
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	311	416	1.14E-24	IPR011009
SUPERFAMILY	SSF51110	alpha-D-mannose-specific plant lectins	10	121	4.45E-16	IPR036426
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	291	401	2.9E-32	-
SMART	SM00219	tyrkin_6	326	489	1.1E-4	IPR020635
ProSiteProfiles	PS50011	Protein kinase domain profile.	326	502	12.061262	IPR000719
ProSiteProfiles	PS50927	Bulb-type lectin domain profile.	1	88	10.279585	IPR001480

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

Best hit

Source	Best Hit ID	Description
TAIR	AT1G67520.1	lectin protein kinase family protein.
RefSeq	XP_039060220.1	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X2 [Hibiscus syriacus]
Swiss-Prot	Q9LW83	G-type lectin S-receptor-like serine/threonine-protein kinase CES101 OS=Arabidopsis thaliana OX=3702 GN=CES101 PE=2 SV=2
TrEMBL	A0A6A3C5M5	Receptor-like serine/threonine-protein kinase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00010533pilonHSYRG00245 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-3617, nbisL1-mrna-8227