Basic Information
Locus ID:
nbisL1-mrna-8221
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
L-type lectin-domain containing receptor kinase IX.1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 51866872 | 51867882 | + | nbisL1-mrna-8221 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.48 | 34,193.98 Da | 40.86 | 87.02 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 198 | 291 | 5.3E-16 | IPR001245 |
| SUPERFAMILY | SSF55797 | PR-1-like | 1 | 91 | 3.27E-13 | IPR035940 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 178 | 288 | 1.83E-28 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 182 | 272 | 2.0E-32 | - |
| SMART | SM00198 | SCP_3 | 1 | 87 | 0.0028 | IPR014044 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 196 | 309 | 14.70432 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 202 | 225 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10530.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_039070411.1 | L-type lectin-domain containing receptor kinase IX.2-like [Hibiscus syriacus] | 0 |
| Q9LXA5 | L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK91 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A3BG45 | Lateral organ boundaries domain family protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110187pilonHSYRG00118 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg265, jg28762, jg36600 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_22847 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000011872 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 4 | nbisL1-mrna-5692, nbisL1-mrna-5695, nbisL1-mrna-5699 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0199250.1 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr20G012380 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G1011800 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC4BG055090 |
| Poaceae | Zea mays | 1 | Zm00001eb217820_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-58734, nbis-gene-58813 |