Basic Information
Locus ID:
nbisL1-mrna-804
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Short Name:
CPK30
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 8156915 | 8160563 | + | nbisL1-mrna-804 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.60 | 59,813.62 Da | 33.69 | 79.96 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 73 | 303 | 2.7283E-96 | - |
| Pfam | PF13499 | EF-hand domain pair | 350 | 411 | 3.2E-11 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 76 | 229 | 3.7E-41 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 247 | 304 | 8.7E-9 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 422 | 485 | 1.3E-14 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 332 | 511 | 3.57E-47 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 57 | 328 | 7.42E-63 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 312 | 488 | 3.7E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 78 | 154 | 1.6E-66 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 116 | 305 | 1.6E-66 | - |
| SMART | SM00054 | efh_1 | 459 | 487 | 6.0E-7 | IPR002048 |
| SMART | SM00220 | serkin_6 | 74 | 304 | 9.6E-56 | IPR000719 |
| SMART | SM00054 | efh_1 | 423 | 451 | 4.7E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 387 | 415 | 0.0032 | IPR002048 |
| SMART | SM00054 | efh_1 | 351 | 379 | 2.8E-7 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 347 | 382 | 16.521873 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 455 | 490 | 14.792358 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 419 | 454 | 14.959732 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 383 | 418 | 9.799083 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 74 | 304 | 31.128027 | IPR000719 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 468 | 480 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 360 | 372 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 194 | 206 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 80 | 103 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 432 | 444 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 396 | 408 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 46 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_021679214.1 | calcium-dependent protein kinase 10-like [Hevea brasiliensis] | 0 |
| Q9M9V8 | Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2L9J9 | Calcium-dependent protein kinase 30 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology