Basic Information
Locus ID:
nbisL1-mrna-7999
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 12997585 | 13008877 | + | nbisL1-mrna-7999 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 231,043.33 Da | 47.32 | 73.49 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 1523 | 1752 | 5.59422E-82 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 1523 | 1750 | 1.0E-59 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 1849 | 1960 | 3.4E-16 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1832 | 2075 | 4.13E-44 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 1523 | 1755 | 9.06E-59 | IPR013320 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1953 | 2077 | 8.2E-26 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 1520 | 1754 | 3.1E-66 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1810 | 1924 | 3.0E-29 | - |
| SMART | SM00220 | serkin_6 | 1849 | 2056 | 1.3E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1849 | 2091 | 13.587734 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1855 | 1878 | - | IPR017441 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 1635 | 1641 | - | IPR019825 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1197 | 1232 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1306 | 1405 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1306 | 1470 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 373 | 392 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 367 | 392 | - | - |
| Coils | Coil | Coil | 1268 | 1348 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_011044913.1 | PREDICTED: probable L-type lectin-domain containing receptor kinase S.7 isoform X1 [Populus euphratica] | 0 |
| Q9FHG4 | Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1Q3BLU0 | Pkinase domain-containing protein/Lectin_legB domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_12327 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology