Basic Information
Locus ID:
nbisL1-mrna-7978
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 26534097 | 26538089 | - | nbisL1-mrna-7978 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 90,694.40 Da | 46.49 | 101.95 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 358 | 664 | 1.65E-13 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 94 | 349 | 6.67E-17 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 629 | 764 | 2.59E-11 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 307 | 493 | 7.8E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 589 | 767 | 3.2E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 5 | 248 | 5.1E-12 | IPR032675 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_043815126.1 | LOW QUALITY PROTEIN: uncharacterized protein LOC110621158 [Manihot esculenta] | 0 |
| TrEMBL | A0A8T2XBS2 | NB-ARC domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_023210 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology