Basic Information
Locus ID:
nbisL1-mrna-7977
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Blue copper
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 49622358 | 49622992 | - | nbisL1-mrna-7977 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.78 | 13,368.77 Da | 28.25 | 68.67 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 9 | 107 | 3.38291E-43 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 23 | 101 | 7.3E-22 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 8 | 108 | 7.66E-32 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 6 | 110 | 8.4E-33 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 9 | 109 | 36.666237 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17675.1 | Cupredoxin superfamily protein. Encodes a Plantacyanin/Basic blue family protein | 0 |
| RefSeq | XP_039006155.1 | blue copper protein 1a-like [Hibiscus syriacus] | 0 |
| A0A0M4FTF3 | Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A3A807 | Putative Uclacyanin 1 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110584pilonHSYRG00391 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology