Basic Information
Locus ID:
nbisL1-mrna-7972
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002078F_pilon | 3146644 | 3149906 | + | nbisL1-mrna-7972 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 108,420.40 Da | 39.02 | 104.67 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 505 | 565 | 2.5E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 72 | 1.4E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 99 | 159 | 3.6E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 694 | 880 | 2.6E-37 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 237 | 280 | 4.0E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 687 | 935 | 1.05E-58 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 295 | 623 | 1.1E-44 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 59 | 380 | 4.42E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 185 | 2.2E-41 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 186 | 290 | 4.1E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 339 | 626 | 3.4E-70 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 678 | 941 | 3.7E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 291 | 337 | 4.0E-10 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 504 | 528 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 98 | 122 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 552 | 576 | 74.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 218 | 110.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 692 | 939 | 5.5E-13 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 243 | 267 | 5.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 146 | 170 | 49.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 314 | 338 | 87.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 692 | 980 | 30.873615 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 698 | 721 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 827 | 839 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_021646548.1 | receptor-like protein kinase 5 isoform X1 [Hevea brasiliensis] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2NFR4 | Serine-threonine protein kinase plant-type OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology