Basic Information
Locus ID:
nbisL1-mrna-7970
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Short Name:
CAX5
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 13225829 | 13229019 | + | nbisL1-mrna-7970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 49,559.46 Da | 29.59 | 105.92 | 0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 292 | 433 | 1.9E-21 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 104 | 259 | 1.2E-20 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 275 | 435 | 1.7E-20 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 133 | 271 | 1.4E-14 | IPR044880 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 72 | 434 | 1.0E-114 | - |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 85 | 434 | 1.3E-102 | IPR004798 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_021645986.1 | vacuolar cation/proton exchanger 5-like isoform X1 [Hevea brasiliensis] | 0 |
| Q8L783 | Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana OX=3702 GN=CAX5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2L0Q4 | Vacuolar cation/proton exchanger OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology