Basic Information
Locus ID:
nbisL1-mrna-7964
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Blue copper
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 49456383 | 49457051 | - | nbisL1-mrna-7964 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.80 | 16,767.23 Da | 24.20 | 94.38 | 0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 25 | 122 | 1.60208E-45 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 34 | 116 | 6.2E-22 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 23 | 123 | 7.55E-34 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 21 | 125 | 7.4E-35 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 24 | 124 | 40.130367 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G72230.1 | Cupredoxin superfamily protein. | 0 |
| RefSeq | XP_039000123.1 | blue copper protein 1a-like [Hibiscus syriacus] | 0 |
| A0A072U307 | Blue copper protein 1b OS=Medicago truncatula OX=3880 GN=BCP1B PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A3AJE1 | Putative Uclacyanin 1 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110445pilonHSYRG00086 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology