Basic Information
Locus ID:
nbisL1-mrna-7962
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 26403983 | 26416123 | + | nbisL1-mrna-7962 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 175,089.81 Da | 43.83 | 102.74 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 176 | 414 | 4.6E-32 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 159 | 428 | 5.58E-42 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 488 | 881 | 1.96E-28 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 919 | 1332 | 1.02E-18 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1231 | 1488 | 4.71E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 903 | 1096 | 3.7E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1097 | 1259 | 2.1E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 516 | 902 | 1.3E-33 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 148 | 329 | 2.4E-29 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 333 | 417 | 9.6E-13 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1304 | 1517 | 8.9E-13 | IPR032675 |
| PRINTS | PR00364 | Disease resistance protein signature | 641 | 657 | 9.5E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 183 | 198 | 9.5E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 364 | 378 | 9.5E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 256 | 270 | 9.5E-19 | - |
| Coils | Coil | Coil | 71 | 101 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_015576964.2 | - | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2MMH8 | Putative disease resistance protein At4g27220 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology