Basic Information
Locus ID:
nbisL1-mrna-7949
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000110F_pilon | 3888097 | 3891277 | + | nbisL1-mrna-7949 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 53,573.86 Da | 40.54 | 101.82 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 6 | 43 | 4.2E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 4 | 60 | 2.88E-12 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 138 | 354 | 2.75E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 90 | 359 | 1.2E-8 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 46 | 2.1E-7 | - |
| SMART | SM00256 | fbox_2 | 10 | 50 | 0.0093 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 4 | 52 | 9.02057 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_006427013.1 | F-box/LRR-repeat protein At4g14103 isoform X2 [Citrus clementina] | 0 |
| TrEMBL | A0A2P2LVU8 | F-box domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology