Basic Information
Locus ID:
nbisL1-mrna-7899
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 9137755 | 9143784 | - | nbisL1-mrna-7899 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.11 | 115,352.78 Da | 52.51 | 79.10 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01366 | KISc_C_terminal | 422 | 746 | 5.68722E-169 | - |
| Pfam | PF00225 | Kinesin motor domain | 430 | 743 | 1.5E-103 | IPR001752 |
| Pfam | PF00307 | Calponin homology (CH) domain | 45 | 162 | 1.9E-15 | IPR001715 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 424 | 780 | 1.53E-118 | IPR027417 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 50 | 176 | 1.93E-23 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 419 | 786 | 2.6E-131 | IPR036961 |
| Gene3D | G3DSA:1.10.418.10 | - | 35 | 163 | 4.6E-28 | IPR036872 |
| SMART | SM00033 | ch_5 | 44 | 161 | 5.9E-11 | IPR001715 |
| SMART | SM00129 | kinesin_4 | 422 | 752 | 3.9E-166 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 42 | 163 | 18.56863 | IPR001715 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 424 | 744 | 121.694344 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 644 | 655 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 614 | 631 | 3.0E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 498 | 519 | 3.0E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 694 | 715 | 3.0E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 645 | 663 | 3.0E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 333 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 947 | 1044 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1004 | 1018 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 774 | 793 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 954 | 978 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 849 | 868 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 333 | - | - |
| Coils | Coil | Coil | 751 | 778 | - | - |
| Coils | Coil | Coil | 404 | 424 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27000.1 | kinesin 4. Encodes a kinesin-like protein that binds microtubules in an ATP-dependent manner. | 0 |
| RefSeq | XP_034912939.1 | kinesin-like protein KIN-14G [Populus alba] | 0 |
| O81635 | Kinesin-like protein KIN-14G OS=Arabidopsis thaliana OX=3702 GN=KIN14G PE=1 SV=2 | 0 | |
| TrEMBL | A0A4U5QT44 | Kinesin-4-like OS=Populus alba OX=43335 GN=D5086_0000049830 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology