Basic Information
Locus ID:
nbisL1-mrna-7882
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Peptidyl-prolyl cis-trans isomerase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002078F_pilon | 2585396 | 2592890 | - | nbisL1-mrna-7882 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.97 | 87,198.63 Da | 102.92 | 47.00 | -1.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00160 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 24 | 223 | 7.4E-29 | IPR002130 |
| SUPERFAMILY | SSF50891 | Cyclophilin-like | 14 | 227 | 2.34E-45 | IPR029000 |
| Gene3D | G3DSA:2.40.100.10 | - | 5 | 225 | 2.8E-52 | IPR029000 |
| ProSiteProfiles | PS50072 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 22 | 224 | 27.95179 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 157 | 172 | 6.7E-11 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 185 | 200 | 6.7E-11 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 39 | 54 | 6.7E-11 | IPR002130 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 565 | 591 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 712 | 752 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 629 | 645 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 455 | 521 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 425 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 228 | 769 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 228 | 251 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 649 | 671 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 343 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 432 | 453 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 525 | 547 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 293 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 691 | 705 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 365 | 380 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32420.1 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein. | 0 |
| RefSeq | XP_038696179.1 | - | 0 |
| Q8RWY7 | Peptidyl-prolyl cis-trans isomerase CYP95 OS=Arabidopsis thaliana OX=3702 GN=CYP95 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2LYD2 | Uncharacterized protein MANES_16G119700 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology