Basic Information
Locus ID:
nbisL1-mrna-7873
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 25342868 | 25344001 | - | nbisL1-mrna-7873 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.36 | 10,660.43 Da | 50.62 | 93.37 | 0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 18 | 98 | 1.3E-14 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 16 | 97 | 7.87E-23 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 4 | 98 | 3.8E-22 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 98 | 13.502931 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04012 (ErbB signaling pathway)
map04012 (ErbB signaling pathway)
ko04020 (Calcium signaling pathway)
map04020 (Calcium signaling pathway)
ko04024 (cAMP signaling pathway)
map04024 (cAMP signaling pathway)
ko04066 (HIF-1 signaling pathway)
map04066 (HIF-1 signaling pathway)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
map04217 (Necroptosis)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04745 (Phototransduction - fly)
map04745 (Phototransduction - fly)
ko04750 (Inflammatory mediator regulation of TRP channels)
map04750 (Inflammatory mediator regulation of TRP channels)
ko04916 (Melanogenesis)
map04916 (Melanogenesis)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08650.2 | phosphoenolpyruvate carboxylase kinase 1. Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light. | 0 |
| RefSeq | XP_021622621.1 | phosphoenolpyruvate carboxylase kinase 2 [Manihot esculenta] | 0 |
| Q9SPK4 | Phosphoenolpyruvate carboxylase kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PPCK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2MZP0 | Uncharacterized protein MANES_09G148600 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology