Basic Information
Locus ID:
nbisL1-mrna-7862
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Targeting protein for Xklp2 (TPX2)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002078F_pilon | 2474568 | 2477435 | + | nbisL1-mrna-7862 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.33 | 41,046.38 Da | 45.51 | 70.69 | -0.87 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 165 | 242 | 9.0E-19 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 133 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 215 | 353 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 105 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 285 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 110 | 126 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 334 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32330.2 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_043811330.1 | - | 0 |
| Q94C48 | Protein WVD2-like 5 OS=Arabidopsis thaliana OX=3702 GN=WDL5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KN22 | TPX2 domain-containing protein OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology