Basic Information
Locus ID:
nbisL1-mrna-7859
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Short Name:
NEK1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 47742384 | 47745924 | - | nbisL1-mrna-7859 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.64 | 62,219.27 Da | 51.94 | 76.91 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 19 | 190 | 1.1E-33 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 24 | 229 | 1.41E-47 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 11 | 233 | 1.3E-46 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 191 | 29.460215 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 464 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 349 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 464 | 491 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 321 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G54510.1 | NIMA-related serine/threonine kinase 1. Encodes AtNEK1, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_039039460.1 | serine/threonine-protein kinase Nek1-like [Hibiscus syriacus] | 0 |
| Q9SLI2 | Serine/threonine-protein kinase Nek1 OS=Arabidopsis thaliana OX=3702 GN=NEK1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6A3CRD1 | Serine/threonine-protein kinase Nek2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00003435pilonHSYRG00136 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology