Basic Information
Locus ID:
nbisL1-mrna-7791
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 8261099 | 8274805 | + | nbisL1-mrna-7791 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.61 | 234,201.95 Da | 43.77 | 102.27 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 159 | 311 | 4.54661E-4 | - |
| Pfam | PF00931 | NB-ARC domain | 162 | 394 | 1.1E-42 | IPR002182 |
| SUPERFAMILY | SSF52047 | RNI-like | 1905 | 2040 | 7.38E-9 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 467 | 1004 | 2.11E-27 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1624 | 1946 | 3.84E-14 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 156 | 408 | 1.85E-45 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 1372 | 1612 | 9.42E-13 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1072 | 1441 | 2.2E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1219 | 1518 | 2.3E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1031 | 1214 | 2.6E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1836 | 2046 | 3.6E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1526 | 1769 | 2.7E-14 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 153 | 309 | 1.4E-27 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 311 | 396 | 2.3E-16 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 499 | 1021 | 1.2E-34 | IPR032675 |
| PRINTS | PR00364 | Disease resistance protein signature | 252 | 266 | 5.7E-17 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 340 | 354 | 5.7E-17 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 179 | 194 | 5.7E-17 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 616 | 632 | 5.7E-17 | - |
| Coils | Coil | Coil | 57 | 98 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_024438815.2 | uncharacterized protein LOC18104040 [Populus trichocarpa] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T2XBS2 | NB-ARC domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_023210 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology