Basic Information
Locus ID:
nbisL1-mrna-7784
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Autophagy-related protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 8201539 | 8205241 | + | nbisL1-mrna-7784 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.75 | 54,849.97 Da | 40.79 | 86.34 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 176 | 435 | 4.5E-40 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 154 | 438 | 5.53E-75 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 250 | 463 | 2.1E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 133 | 247 | 5.9E-23 | - |
| SMART | SM00220 | serkin_6 | 173 | 444 | 2.1E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 173 | 444 | 35.226887 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 179 | 201 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 292 | 304 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 41 | 96 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 18 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05140.2 | - | 0 |
| RefSeq | XP_034920324.1 | receptor-like cytosolic serine/threonine-protein kinase RBK2 isoform X2 [Populus alba] | 0 |
| Q8RXC8 | Receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Arabidopsis thaliana OX=3702 GN=RBK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A836AX85 | Receptor cytosolic serine/threonine-protein kinase OS=Salix suchowensis OX=1278906 GN=IMY05_013G0027500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology