Basic Information
Locus ID:
nbisL1-mrna-7766
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 46688866 | 46693284 | + | nbisL1-mrna-7766 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.65 | 79,281.92 Da | 47.46 | 89.68 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 336 | 674 | 2.72064E-113 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 308 | 661 | 2.0E-82 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 336 | 686 | 3.37E-54 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 377 | 676 | 6.5E-39 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 162 | 185 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 127 | 152 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 108 | 122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 108 | 185 | - | - |
| Coils | Coil | Coil | 267 | 287 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_039016366.1 | probable galacturonosyltransferase 4 isoform X1 [Hibiscus syriacus] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A2ZCI1 | Hexosyltransferase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110933pilonHSYRG00231 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology