Basic Information
Locus ID:
nbisL1-mrna-7742
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 7781338 | 7784585 | + | nbisL1-mrna-7742 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 101,697.57 Da | 32.78 | 101.08 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 291 | 306 | 1.1 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 72 | 9.0E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 484 | 543 | 2.0E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 775 | 868 | 1.3E-8 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 60 | 309 | 1.33E-56 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 226 | 591 | 5.1E-74 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 690 | 896 | 5.91E-31 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 179 | 280 | 9.0E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 381 | 624 | 5.0E-66 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 778 | 919 | 5.5E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 281 | 380 | 5.0E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 178 | 9.1E-38 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 703 | 777 | 1.2E-8 | - |
| SMART | SM00369 | LRR_typ_2 | 434 | 458 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 218 | 34.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 506 | 530 | 50.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 554 | 578 | 61.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 338 | 362 | 32.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 266 | 290 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 98 | 122 | 66.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 436 | 458 | 7.080498 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 508 | 530 | 7.095899 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 708 | 926 | 11.31216 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 714 | 738 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 554 | 567 | 7.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 293 | 306 | 7.7E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08590.1 | Leucine-rich receptor-like protein kinase family protein. similar to CLV1-like leucine rich repeat transmembrane receptor-like protein kinase (Ipomoea nil) (U77888) | 0 |
| RefSeq | XP_048236074.1 | leucine-rich repeat receptor-like protein kinase PXL1 [Ricinus communis] | 0 |
| Q9FRS6 | Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana OX=3702 GN=PXL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8J4QQW1 | Protein kinase domain-containing protein OS=Castanea mollissima OX=60419 GN=CMV_017522 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology