Basic Information
Locus ID:
nbisL1-mrna-7723
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 7515077 | 7516802 | - | nbisL1-mrna-7723 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.90 | 40,361.41 Da | 47.13 | 87.62 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 52 | 320 | 8.13422E-91 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 49 | 319 | 2.3E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 26 | 319 | 1.62E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 16 | 123 | 3.2E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 124 | 331 | 2.3E-57 | - |
| SMART | SM00220 | serkin_6 | 46 | 297 | 2.6E-36 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 12 | 326 | 6.8E-34 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 46 | 312 | 38.70385 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 170 | 182 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 52 | 74 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 336 | 357 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16670.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021681882.1 | putative serine/threonine-protein kinase isoform X1 [Hevea brasiliensis] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9VCA4 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_08G006500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology