Basic Information
Locus ID:
nbisL1-mrna-7706
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 23660470 | 23664134 | + | nbisL1-mrna-7706 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.73 | 80,464.36 Da | 44.07 | 92.47 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52058 | L domain-like | 7 | 215 | 8.84E-10 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 148 | 582 | 4.24E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 137 | 228 | 5.7E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 229 | 312 | 6.3E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 5 | 136 | 7.3E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 324 | 660 | 4.4E-12 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 682 | 704 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_052302605.1 | disease resistance protein At4g27190 isoform X10 [Populus trichocarpa] | 0 |
| TrEMBL | A0A8X8CEW0 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_044954 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology