Basic Information
Locus ID:
nbisL1-mrna-7704
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 46027361 | 46036050 | + | nbisL1-mrna-7704 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.47 | 74,446.57 Da | 37.47 | 88.87 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 239 | 475 | 2.4E-39 | IPR000490 |
| Pfam | PF07983 | X8 domain | 541 | 612 | 1.8E-20 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 238 | 523 | 2.32E-58 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 238 | 476 | 1.0E-63 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 477 | 530 | 5.6E-11 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 534 | 644 | 1.7E-11 | - |
| SMART | SM00768 | X8_cls | 540 | 625 | 3.7E-48 | IPR012946 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 64 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_039020037.1 | glucan endo-1,3-beta-glucosidase 1-like [Hibiscus syriacus] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | A0A6A2Z5K8 | glucan endo-1,3-beta-D-glucosidase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111069pilonHSYRG00165 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology