Basic Information
Locus ID:
nbisL1-mrna-7695
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002078F_pilon | 1068486 | 1076091 | + | nbisL1-mrna-7695 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 145,574.19 Da | 48.59 | 74.79 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 1056 | 1309 | 9.3101E-108 | - |
| CDD | cd06410 | PB1_UP2 | 189 | 284 | 2.34178E-42 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1052 | 1309 | 1.5E-58 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 202 | 285 | 3.4E-19 | IPR000270 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 201 | 290 | 7.29E-21 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1041 | 1308 | 2.87E-74 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 204 | 285 | 5.9E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1138 | 1315 | 6.8E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1043 | 1137 | 5.1E-25 | - |
| SMART | SM00666 | PB1_new | 200 | 286 | 1.1E-29 | IPR000270 |
| SMART | SM00220 | serkin_6 | 1050 | 1312 | 1.2E-56 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1050 | 1311 | 39.566025 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1175 | 1187 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1056 | 1081 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1132 | 1145 | 1.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1236 | 1258 | 1.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1169 | 1187 | 1.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1280 | 1302 | 1.6E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 141 | 162 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 367 | 442 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35050.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_011018312.1 | PREDICTED: uncharacterized protein LOC105121394 [Populus euphratica] | 0 |
| O64768 | RAF-like serine/threonine-protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=RAF24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2M002 | Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology