Basic Information
Locus ID:
nbisL1-mrna-7690
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 45838716 | 45839946 | - | nbisL1-mrna-7690 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 19,933.86 Da | 31.14 | 111.85 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 10 | 85 | 1.2E-9 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 62 | 2.53E-14 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 50 | 1.3E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 60 | 166 | 9.4E-9 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 178 | 12.65489 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61860.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_039020108.1 | probable serine/threonine-protein kinase PBL23 [Hibiscus syriacus] | 0 |
| F4JEQ2 | Probable serine/threonine-protein kinase PBL23 OS=Arabidopsis thaliana OX=3702 GN=PBL23 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8J4W0M5 | Protein kinase domain-containing protein OS=Castanea mollissima OX=60419 GN=CMV_010592 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-7690 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG14.1047 |