Basic Information
Locus ID:
nbisL1-mrna-7688
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 23430706 | 23432040 | + | nbisL1-mrna-7688 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.57 | 47,965.02 Da | 37.45 | 81.01 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 97 | 441 | 2.52508E-80 | IPR034161 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 97 | 267 | 2.7E-50 | IPR032861 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 290 | 437 | 8.0E-22 | IPR032799 |
| SUPERFAMILY | SSF50630 | Acid proteases | 90 | 442 | 5.63E-84 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 76 | 265 | 2.4E-50 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 266 | 444 | 2.2E-37 | IPR021109 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 21 | 5.0 | - |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 97 | 437 | 40.450104 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 322 | 333 | - | IPR001969 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_021658675.1 | aspartic proteinase CDR1-like [Hevea brasiliensis] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A6LZE5 | Peptidase A1 domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_021369 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology