Basic Information
Locus ID:
nbisL1-mrna-7662
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
metal tolerance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000106F_pilon | 5570563 | 5576043 | + | nbisL1-mrna-7662 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.19 | 27,287.67 Da | 34.20 | 105.65 | 0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01545 | Cation efflux family | 2 | 143 | 4.5E-20 | IPR002524 |
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 150 | 224 | 2.2E-12 | IPR027470 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 147 | 224 | 2.88E-16 | IPR036837 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 2 | 145 | 1.1E-26 | IPR027469 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 1 | 143 | 2.0E-28 | IPR027469 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 149 | 225 | 8.9E-17 | IPR036837 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16310.2 | - | 0 |
| RefSeq | XP_043810648.1 | metal tolerance protein 10 isoform X2 [Manihot esculenta] | 0 |
| Q0WU02 | Metal tolerance protein 10 OS=Arabidopsis thaliana OX=3702 GN=MTP10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7J0G4T2 | Cation efflux family protein OS=Actinidia rufa OX=165716 GN=Acr_17g0013700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology