Basic Information
Locus ID:
nbisL1-mrna-7638
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000106F_pilon | 5387951 | 5399485 | - | nbisL1-mrna-7638 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.61 | 113,559.99 Da | 32.27 | 89.91 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 707 | 969 | 1.74135E-97 | - |
| Pfam | PF00069 | Protein kinase domain | 702 | 943 | 1.5E-45 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 298 | 357 | 1.6E-7 | IPR001611 |
| Pfam | PF11721 | Malectin domain | 433 | 618 | 3.2E-47 | IPR021720 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 680 | 969 | 2.6E-80 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 104 | 412 | 6.8E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 286 | 421 | 6.3E-24 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 432 | 622 | 2.9E-38 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 663 | 776 | 5.3E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 777 | 981 | 3.5E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 285 | 5.3E-45 | IPR032675 |
| SMART | SM00220 | serkin_6 | 701 | 969 | 8.7E-33 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 322 | 344 | 7.419328 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 701 | 975 | 37.67207 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 821 | 833 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1004 | 1029 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.2 | - | 0 |
| RefSeq | XP_021615709.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X1 [Manihot esculenta] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2C9VRR7 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_06G174700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology